The Great London [Search results for Human Evolution

  • Ecosystems: Humans artificially drive evolution of new species

    Ecosystems: Humans artificially drive evolution of new species

    Species across the world are rapidly going extinct due to human activities, but humans are also causing rapid evolution and the emergence of new species. A new study published today summarises the causes of humanmade speciation, and discusses why newly evolved species cannot simply replace extinct wild species. The study was led by the Center for Macroecology, Evolution and Climate at the University of Copenhagen.

    Humans artificially drive evolution of new species
    The London Underground Mosquito (Culex pipiens molestus) has been found in underground systems around the world.
    It is believed to have evolved from the common house mosquito through a subterranean population 
    [Credit: Walkabout12/WikiCommons]

    A growing number of examples show that humans not only contribute to the extinction of species but also drive evolution, and in some cases the emergence of entirely new species. This can take place through mechanisms such as accidental introductions, domestication of animals and crops, unnatural selection due to hunting, or the emergence of novel ecosystems such as the urban environment.

    Although tempting to conclude that human activities thus benefit as well as deplete global biodiversity, the authors stress that extinct wild species cannot simply be replaced with newly evolved ones, and that nature conservation remains just as urgent.

    "The prospect of 'artificially' gaining novel species through human activities is unlikely to elicit the feeling that it can offset losses of 'natural' species. Indeed, many people might find the prospect of an artificially biodiverse world just as daunting as an artificially impoverished one" says lead author and Postdoc Joseph Bull from the Center for Macroecology, Evolution and Climate at the University of Copenhagen.

    The study which was carried out in collaboration with the University of Queensland was published in >Proceedings of Royal Society B. It highlights numerous examples of how human activities influence species' evolution. For instance: as the common house mosquito adapted to the environment of the underground railway system in London, it established a subterranean population. Now named the 'London Underground mosquito', it can no longer interbreed with its above ground counterpart and is effectively thought to be a new species.

    Humans artificially drive evolution of new species
    Recent genetic data for the damselfly Megaloprepus caerulatus in Central America suggests 
    that forest fragmentation has led it to diverge into more than one species 
    [Credit: Katja Schultz via Flickr]

    "We also see examples of domestication resulting in new species. According to a recent study, at least six of the world's 40 most important agricultural crops are considered entirely new" explains Joseph Bull.

    Furthermore, unnatural selection due to hunting can lead to new traits emerging in animals, which can eventually lead to new species, and deliberate or accidental relocation of species can lead to hybridization with other species. Due to the latter, more new plant species in Europe have appeared than are documented to have gone extinct over the last three centuries.

    Although it is not possible to quantify exactly how many speciation events have been caused through human activities, the impact is potentially considerable, the study states.

    "In this context, 'number of species' becomes a deeply unsatisfactory measure of conservation trends, because it does not reflect many important aspects of biodiversity. Achieving a neutral net outcome for species numbers cannot be considered acceptable if weighing wild fauna against relatively homogenous domesticated species. However, considering speciation alongside extinction may well prove important in developing a better understanding of our impact upon global biodiversity. We call for a discussion about what we, as a society, actually want to conserve about nature" says Associate Professor Martine Maron from the University of Queensland.

    Researchers do agree that current extinction rates may soon lead to a 6th period of mass extinction. Since the last Ice Age, 11.500 years ago, it is estimated that 255 mammals and 523 bird species has gone extinct, often due to human activity. In the same period, humans have relocated almost 900 known species and domesticated more than 470 animals and close to 270 plant species.

    Source: Faculty of Science - University of Copenhagen [June 28, 2016]

  • East Asia: How China is rewriting the book on human origins

    East Asia: How China is rewriting the book on human origins

    On the outskirts of Beijing, a small limestone mountain named Dragon Bone Hill rises above the surrounding sprawl. Along the northern side, a path leads up to some fenced-off caves that draw 150,000 visitors each year, from schoolchildren to grey-haired pensioners. It was here, in 1929, that researchers discovered a nearly complete ancient skull that they determined was roughly half a million years old. Dubbed Peking Man, it was among the earliest human remains ever uncovered, and it helped to convince many researchers that humanity first evolved in Asia.

    How China is rewriting the book on human origins
    The reconstructed skull of Peking Man, the fossil that launched discussions 
    of human origins in China [Credit: DeAgostini/Getty]

    Since then, the central importance of Peking Man has faded. Although modern dating methods put the fossil even earlier—at up to 780,000 years old—the specimen has been eclipsed by discoveries in Africa that have yielded much older remains of ancient human relatives. Such finds have cemented Africa's status as the cradle of humanity—the place from which modern humans and their predecessors spread around the globe—and relegated Asia to a kind of evolutionary cul-de-sac.

    But the tale of Peking Man has haunted generations of Chinese researchers, who have struggled to understand its relationship to modern humans. "It's a story without an ending," says Wu Xinzhi, a palaeontologist at the Chinese Academy of Sciences' Institute of Vertebrate Paleontology and Paleoanthropology (IVPP) in Beijing. They wonder whether the descendants of Peking Man and fellow members of the species Homo erectus died out or evolved into a more modern species, and whether they contributed to the gene pool of China today.

    Keen to get to the bottom of its people's ancestry, China has in the past decade stepped up its efforts to uncover evidence of early humans across the country. It is reanalysing old fossil finds and pouring tens of millions of dollars a year into excavations. And the government is setting up a US$1.1-million laboratory at the IVPP to extract and sequence ancient DNA.

    The investment comes at a time when palaeoanthropologists across the globe are starting to pay more attention to Asian fossils and how they relate to other early hominins—creatures that are more closely related to humans than to chimps. Finds in China and other parts of Asia have made it clear that a dazzling variety of Homo species once roamed the continent. And they are challenging conventional ideas about the evolutionary history of humanity.

    "Many Western scientists tend to see Asian fossils and artefacts through the prism of what was happening in Africa and Europe," says Wu. Those other continents have historically drawn more attention in studies of human evolution because of the antiquity of fossil finds there, and because they are closer to major palaeoanthropology research institutions, he says. "But it's increasingly clear that many Asian materials cannot fit into the traditional narrative of human evolution."

    Chris Stringer, a palaeoanthropologist at the Natural History Museum in London, agrees. "Asia has been a forgotten continent," he says. "Its role in human evolution may have been largely under-appreciated."

    Evolving story

    In its typical form, the story of Homo sapiens starts in Africa. The exact details vary from one telling to another, but the key characters and events generally remain the same. And the title is always 'Out of Africa'.

    How China is rewriting the book on human origins

    In this standard view of human evolution, H. erectus first evolved there more than 2 million years ago. Then, some time before 600,000 years ago, it gave rise to a new species: Homo heidelbergensis, the oldest remains of which have been found in Ethiopia. About 400,000 years ago, some members of H. heidelbergensis left Africa and split into two branches: one ventured into the Middle East and Europe, where it evolved into Neanderthals; the other went east, where members became Denisovans—a group first discovered in Siberia in 2010. The remaining population of H. heidelbergensis in Africa eventually evolved into our own species, H. sapiens, about 200,000 years ago. Then these early humans expanded their range to Eurasia 60,000 years ago, where they replaced local hominins with a minuscule amount of interbreeding.

    A hallmark of H. heidelbergensis—the potential common ancestor of Neanderthals, Denisovans and modern humans—is that individuals have a mixture of primitive and modern features. Like more archaic lineages, H. heidelbergensis has a massive brow ridge and no chin. But it also resembles H. sapiens, with its smaller teeth and bigger braincase. Most researchers have viewed H. heidelbergensis—or something similar—as a transitional form between H. erectus and H. sapiens.

    Unfortunately, fossil evidence from this period, the dawn of the human race, is scarce and often ambiguous. It is the least understood episode in human evolution, says Russell Ciochon, a palaeoanthropologist at the University of Iowa in Iowa City. "But it's central to our understanding of humanity's ultimate origin."

    The tale is further muddled by Chinese fossils analysed over the past four decades, which cast doubt over the linear progression from African H. erectus to modern humans. They show that, between roughly 900,000 and 125,000 years ago, east Asia was teeming with hominins endowed with features that would place them somewhere between H. erectus and H. sapiens, says Wu.

    "Those fossils are a big mystery," says Ciochon. "They clearly represent more advanced species than H. erectus, but nobody knows what they are because they don't seem to fit into any categories we know."

    How China is rewriting the book on human origins

    The fossils' transitional characteristics have prompted researchers such as Stringer to lump them with H. heidelbergensis. Because the oldest of these forms, two skulls uncovered in Yunxian in Hubei province, date back 900,000 years >1, 2>, Stringer even suggests that H. heidelbergensis might have originated in Asia and then spread to other continents.

    But many researchers, including most Chinese palaeontologists, contend that the materials from China are different from European and African H. heidelbergensis fossils, despite some apparent similarities. One nearly complete skull unearthed at Dali in Shaanxi province and dated to 250,000 years ago, has a bigger braincase, a shorter face and a lower cheekbone than most H. heidelbergensis specimens>3, suggesting that the species was more advanced.

    Such transitional forms persisted for hundreds of thousands of years in China, until species appeared with such modern traits that some researchers have classified them as H. sapiens. One of the most recent of these is represented by two teeth and a lower jawbone, dating to about 100,000 years ago, unearthed in 2007 by IVPP palaeoanthropologist Liu Wu and his colleagues>4. Discovered in Zhirendong, a cave in Guangxi province, the jaw has a classic modern-human appearance, but retains some archaic features of Peking Man, such as a more robust build and a less-protruding chin.

    Most Chinese palaeontologists—and a few ardent supporters from the West—think that the transitional fossils are evidence that Peking Man was an ancestor of modern Asian people. In this model, known as multiregionalism or continuity with hybridization, hominins descended from H. erectus in Asia interbred with incoming groups from Africa and other parts of Eurasia, and their progeny gave rise to the ancestors of modern east Asians, says Wu.

    Support for this idea also comes from artefacts in China. In Europe and Africa, stone tools changed markedly over time, but hominins in China used the same type of simple stone instruments from about 1.7 million years ago to 10,000 years ago. According to Gao Xing, an archaeologist at the IVPP, this suggests that local hominins evolved continuously, with little influence from outside populations.

    Politics at play?

    Some Western researchers suggest that there is a hint of nationalism in Chinese palaeontologists' support for continuity. "The Chinese—they do not accept the idea that H. sapiens evolved in Africa," says one researcher. "They want everything to come from China."

    Chinese researchers reject such allegations. "This has nothing to do with nationalism," says Wu. It's all about the evidence—the transitional fossils and archaeological artefacts, he says. "Everything points to continuous evolution in China from H. erectus to modern human."

    But the continuity-with-hybridization model is countered by overwhelming genetic data that point to Africa as the wellspring of modern humans. Studies of Chinese populations show that 97.4% of their genetic make-up is from ancestral modern humans from Africa, with the rest coming from extinct forms such as Neanderthals and Denisovans>5. "If there had been significant contributions from Chinese H. erectus, they would show up in the genetic data," says Li Hui, a population geneticist at Fudan University in Shanghai. Wu counters that the genetic contribution from archaic hominins in China could have been missed because no DNA has yet been recovered from them.

    Many researchers say that there are ways to explain the existing Asian fossils without resorting to continuity with hybridization. The Zhirendong hominins, for instance, could represent an exodus of early modern humans from Africa between 120,000 and 80,000 years ago. Instead of remaining in the Levant in the Middle East, as was thought previously, these people could have expanded into east Asia, says Michael Petraglia, an archaeologist at the University of Oxford, UK.

    How China is rewriting the book on human origins
    Dozens of teeth from a cave in Daoxian, China, have been attributed to modern humans 
    and date to 120,000–80,000 years ago [Credit: S. Xing and X-J. Wu]

    Other evidence backs up this hypothesis: excavations at a cave in Daoxian in China's Hunan province have yielded 47 fossil teeth so modern-looking that they could have come from the mouths of people today. But the fossils are at least 80,000 years old, and perhaps 120,000 years old, Liu and his colleagues reported last year>6. "Those early migrants may have interbred with archaic populations along the way or in Asia, which could explain Zhirendong people's primitive traits," says Petraglia.

    Another possibility is that some of the Chinese fossils, including the Dali skull, represent the mysterious Denisovans, a species identified from Siberian fossils that are more than 40,000 years old. Palaeontologists don't know what the Denisovans looked like, but studies of DNA recovered from their teeth and bones indicate that this ancient population contributed to the genomes of modern humans, especially Australian Aborigines, Papua New Guineans and Polynesians—suggesting that Denisovans might have roamed Asia.

    Maria Martinon-Torres, a palaeoanthropologist at University College London, is among those who proposed that some of the Chinese hominins were Denisovans. She worked with IVPP researchers on an analysis>7, published last year, of a fossil assemblage uncovered at Xujiayao in Hebei province—including partial jaws and nine teeth dated to 125,000–100,000 years ago. The molar teeth are massive, with very robust roots and complex grooves, reminiscent of those from Denisovans, she says.

    A third idea is even more radical. It emerged when Martinon-Torres and her colleagues compared more than 5,000 fossil teeth from around the world: the team found that Eurasian specimens are more similar to each other than to African ones>8. That work and more recent interpretations of fossil skulls suggest that Eurasian hominins evolved separately from African ones for a long stretch of time. The researchers propose that the first hominins that left Africa 1.8 million years ago were the eventual source of modern humans. Their descendants mostly settled in the Middle East, where the climate was favourable, and then produced waves of transitional hominins that spread elsewhere. One Eurasian group went to Indonesia, another gave rise to Neanderthals and Denisovans, and a third ventured back into Africa and evolved into H. sapiens, which later spread throughout the world. In this model, modern humans evolved in Africa, but their immediate ancestor originated in the Middle East.

    Not everybody is convinced. "Fossil interpretations are notoriously problematic," says Svante Paabo, a palaeogeneticist at the Max Planck Institute for Evolutionary Anthropology in Leipzig, Germany. But DNA from Eurasian fossils dating to the start of the human race could help to reveal which story—or combination—is correct. China is now making a push in that direction. Qiaomei Fu, a palaeogeneticist who did her PhD with Paabo, returned home last year to establish a lab to extract and sequence ancient DNA at the IVPP. One of her immediate goals is to see whether some of the Chinese fossils belong to the mysterious Denisovan group. The prominent molar teeth from Xujiayao will be an early target. "I think we have a prime suspect here," she says.

    Fuzzy picture

    Despite the different interpretations of the Chinese fossil record, everybody agrees that the evolutionary tale in Asia is much more interesting than people appreciated before. But the details remain fuzzy, because so few researchers have excavated in Asia.

    When they have, the results have been startling. In 2003, a dig on Flores island in Indonesia turned up a diminutive hominin>9, which researchers named Homo floresiensis and dubbed the hobbit. With its odd assortment of features, the creature still provokes debate about whether it is a dwarfed form of H. erectus or some more primitive lineage that made it all the way from Africa to southeast Asia and lived until as recently as 60,000 years ago. Last month, more surprises emerged from Flores, where researchers found the remains of a hobbit-like hominin in rocks about 700,000 years old>10.

    Recovering more fossils from all parts of Asia will clearly help to fill in the gaps. Many palaeoanthropologists also call for better access to existing materials. Most Chinese fossils—including some of the finest specimens, such as the Yunxian and Dali skulls—are accessible only to a handful of Chinese palaeontologists and their collaborators. "To make them available for general studies, with replicas or CT scans, would be fantastic," says Stringer. Moreover, fossil sites should be dated much more rigorously, preferably by multiple methods, researchers say.

    But all agree that Asia—the largest continent on Earth—has a lot more to offer in terms of unravelling the human story. "The centre of gravity," says Petraglia, "is shifting eastward."

    Author: Jane Qiu | Source: Nature 535, 22–25 (14 July 2016) doi:10.1038/535218a [July 15, 2016]

  • Recommended Reading: 'Map of Life' predicts ET, so where is he?

    Recommended Reading: 'Map of Life' predicts ET, so where is he?

    Extra-terrestrials that resemble humans should have evolved on other, Earth-like planets, making it increasingly paradoxical that we still appear to be alone in the universe, the author of a new study on convergent evolution has claimed.

    'Map of Life' predicts ET, so where is he?
    The camera eye of an octopus is structurally similar to that of a human, but has
     evolved independently, making it a classic example of convergent evolution 
    [Credit: albert kok/WikiCommons]

    The argument is one of several that emerge from The Runes Of Evolution, a new book in which the leading evolutionary biologist, Professor Simon Conway Morris, makes the case for a ubiquitous "map of life" that governs the way in which all living things develop.

    It builds on the established principle of convergent evolution, a widely-supported theory -- although one still disputed by some biologists -- that different species will independently evolve similar features.

    Conway Morris argues that convergence is not just common, but everywhere, and that it has governed every aspect of life's development on Earth. Proteins, eyes, limbs, intelligence, tool-making -- even our capacity to experience orgasms -- are, he argues, inevitable once life emerges.

    The book claims that evolution is therefore far from random, but a predictable process that operates according to a fairly rigid set of rules.

    If that is the case, then it follows that life similar to that on Earth would also develop in the right conditions on other, equivalent planets. Given the growing number of Earth-like planets of which astronomers are now aware, it is increasingly extraordinary that aliens that look and behave something like us have not been found, he suggests.

    "Convergence is one of the best arguments for Darwinian adaptation, but its sheer ubiquity has not been appreciated," Professor Conway Morris, who is a Fellow at St John's College, University of Cambridge, said.

    "Often, research into convergence is accompanied by exclamations of surprise, describing it as uncanny, remarkable and astonishing. In fact it is everywhere, and that is a remarkable indication that evolution is far from a random process. And if the outcomes of evolution are at least broadly predictable, then what applies on Earth will apply across the Milky Way, and beyond."

    Professor Conway Morris has previously raised the prospect that alien life, if out there, would resemble earthlings -- with limbs, heads, and bodies -- notably at a Royal Society Conference in London in 2010. His new book goes even further, however, adding that any Earth-like planet should also evolve thunniform predators (like sharks), pitcher plants, mangroves, and mushrooms, among many other things.

    Limbs, brains and intelligence would, similarly, be "almost guaranteed." The traits of human-like intelligence have evolved in other species -- the octopus and some birds, for example, both exhibit social playfulness -- and this, the book suggests, indicates that intelligence is an inevitable consequence of evolution that would characterise extraterrestrials as well.

    Click on image to view at Amazon
    Underpinning this is Conway Morris' claim that convergence is demonstrable at every major stepping stone in evolutionary history, from early cells, through to the emergence of tissues, sensory systems, limbs, and the ability to make and use tools.

    The theory, in essence, is that different species will evolve similar solutions to problems via different paths. A commonly-cited example is the octopus, which has evolved a camera eye that is closely similar to that of humans, although distinctive in important ways that reflect its own history. Although octopi and humans have a common ancestor, possibly a slug-like creature, this lived 550 million years ago and lacked numerous complex features that the two now share. The camera eye of each must therefore have evolved independently.

    Conway Morris argues that this process provides an underlying evolutionary framework that defines all life, and leads to innumerable surprises in the natural world. The book cites examples such as collagen, the protein found in connective tissue, which has emerged independently in both fungi and bacteria; or the fact that fruit flies seem to get drunk in the same manner as humans. So too the capacity for disgust in humans -- a hard-wired instinct helping us avoid infection and disease -- is also exhibited by leaf-cutter ants.

    The study also identifies many less obvious evolutionary "analogues," where species have evolved certain properties and characteristics that do not appear to be alike, but are actually very similar. For example, "woodpeckerlike habits" are seen in lemurs and extinct marsupials, while the mechanics of an octopus' tentacles are far closer to those of a human arm than we might expect, and even their suckers can operate rather like hands.

    Conway Morris contends that all life navigates across this evolutionary map, the basis of what he describes as a "predictive biology." "Biology travels through history," he writes, "but ends up at much the same destination."

    This, however, raises fascinating and problematic questions about the possibility of life occurring on other planets. "The number of Earth-like planets seems to be far greater than was thought possible even a few years ago," Conway Morris said. "That doesn't necessarily mean that they have life, because we don't necessarily understand how life originates. The consensus offered by convergence, however, is that life is going to evolve wherever it can."

    "I would argue that in any habitable zone that doesn't boil or freeze, intelligent life is going to emerge, because intelligence is convergent. One can say with reasonable confidence that the likelihood of something analogous to a human evolving is really pretty high. And given the number of potential planets that we now have good reason to think exist, even if the dice only come up the right way every one in 100 throws, that still leads to a very large number of intelligences scattered around, that are likely to be similar to us."

    If this is so, as the book suggests in its introduction, then it makes Enrico Fermi's famous paradox -- why, if aliens exist, we have not yet been contacted -- even more perplexing. "The almost-certainty of ET being out there means that something does not add up, and badly," Conway Morris said. "We should not be alone, but we are."

    The Runes Of Evolution was six years in the making and draws on thousands of academic sources, and throws up numerous other, surprising findings as well. Sabre-teeth, for example, turn out to be convergent, and Conway Morris explains why it is that the clouded leopard of Asia, Neofelis nebulosa, has developed features that could, as it evolves "presage the emergence of a new sabre-tooth," although sadly it looks set to become extinct before this happens. Elsewhere, the study suggests that certain prehistoric creatures other than bats and birds may have attempted to evolve flight.

    "It makes people slightly uneasy that evolution can end up reaching the same solutions to questions about how to catch something, how to digest something, and how to work," Conway Morris added. "But while the number of possibilities in evolution in principle is more than astronomical, the number that actually work is an infinitesimally smaller fraction."

    The Runes Of Evolution, by Simon Conway Morris, is published by Templeton Press

    Source: University of Cambridge [July 02, 2015]

  • Human Evolution: DNA from Neanderthal relative may shake up human family tree

    Human Evolution: DNA from Neanderthal relative may shake up human family tree

    In a remarkable technical feat, researchers have sequenced DNA from fossils in Spain that are about 300,000 to 400,000 years old and have found an ancestor—or close relative—of Neanderthals. The nuclear DNA, which is the oldest ever sequenced from a member of the human family, may push back the date for the origins of the distinct ancestors of Neanderthals and modern humans, according to a presentation here yesterday at the fifth annual meeting of the European Society for the study of human evolution.

    DNA from Neanderthal relative may shake up human family tree
    DNA from these fossilized bones and teeth in a Spanish cave are providing
     clues about the origins of Neanderthals and modern humans 
    [Credit: J.-J. Hublin; Royal Museum For Central Africa,
     Tervuren, Belgium]

    Ever since researchers first discovered thousands of bones and teeth from 28 individuals in the mid-1990s from Sima de los Huesos (“pit of bones”), a cave in the Atapuerca Mountains of Spain, they had noted that the fossils looked a lot like primitive Neanderthals. The Sima people, who lived before Neanderthals, were thought to have emerged in Europe. Yet their teeth, jaws, and large nasal cavities were among the traits that closely resembled those of Neanderthals, according to a team led by paleontologist Juan-Luis Arsuaga of the Complutense University of Madrid. As a result, his team classified the fossils as members of Homo heidelbergensis, a species that lived about 600,000 to 250,000 years ago in Europe, Africa, and Asia. Many researchers have thought H. heidelbergensis gave rise to Neanderthals and perhaps also to our species, H. sapiens, in the past 400,000 years or so.

    But in 2013, the Sima fossils’ identity suddenly became complicated when a study of the maternally inherited mitochondrial DNA (mtDNA) from one of the bones revealed that it did not resemble that of a Neanderthal. Instead, it more closely matched the mtDNA of a Denisovan, an elusive type of extinct human discovered when its DNA was sequenced from a finger bone from Denisova Cave in Siberia. That finding was puzzling, prompting researchers to speculate that perhaps the Sima fossils had interbred with very early Denisovans or that the “Denisovan” mtDNA was the signature of an even more ancient hominin lineage, such as H. erectus. At the time, researchers at the Max Planck Institute for Evolutionary Anthropology in Leipzig, Germany, who had obtained the mtDNA announced that they would try to sequence the nuclear DNA of the fossils to solve the mystery.

    After 2 years of intense effort, paleogeneticist Matthias Meyer of the Max Planck Institute for Evolutionary Anthropology has finally sequenced enough nuclear DNA from fossils of a tooth and a leg bone from the pit to solve the mystery. The task was especially challenging because the ancient DNA was degraded to short fragments, made up of as few as 25 to 40 single nucleotides. (Nucleotides—also known as base pairs—are the building blocks of DNA.) Although he and his colleagues did not sequence the entire genomes of the fossils, Meyer reported at the meeting that they did get 1 million to 2 million base pairs of ancient nuclear DNA.

    DNA from Neanderthal relative may shake up human family tree
    Researchers have spent decades studying the remains found in the 'Pit of Bones', 
    reconstructing the skull shown above, which revealed it had suffered a 
    heavy blow to the head before death [Credit: msf]

    They scanned this DNA for unique markers found only in Neanderthals or Denisovans or modern humans, and found that the two Sima fossils shared far more alleles—different nucleotides at the same address in the genome—with Neanderthals than Denisovans or modern humans. “Indeed, the Sima de los Huesos specimens are early Neanderthals or related to early Neanderthals,” suggesting that the split of Denisovans and Neanderthals should be moved back in time, Meyer reported at the meeting.

    Researchers at the meeting were impressed by this new breakthrough in ancient DNA research. “This has been the next frontier with ancient DNA,” says evolutionary biologist Greger Larson of the University of Oxford in the United Kingdom.

    The close affinity with Neanderthals, but not with Denisovans or modern humans, suggests that the lineage leading to Neanderthals was separate from other archaic humans earlier than most researchers have thought. That means that the ancestors of modern humans also had to split earlier than expected from the population that gave rise to Neanderthals and Denisovans, who were more closely related to each other than they were to modern humans. (Although all three groups interbred at low levels after their evolutionary paths diverged—and such interbreeding may have been the source of the Denisovan mtDNA in the first Sima fossil whose DNA was sequenced.) Indeed, Meyer suggested in his talk that the ancestors of H. sapiens may have diverged from the branch leading to Neanderthals and Denisovans as early as 550,000 to 765,000 years ago, although those results depend on different mutation rates in humans and are still unpublished.

    That would mean that the ancestors of humans were already wandering down a solitary path apart from the other kinds of archaic humans on the planet 100,000 to 400,000 years earlier than expected. “It resolves one controversy—that they’re in the Neanderthal clade,” says paleoanthropologist Chris Stringer of the Natural History Museum in London. “But it’s not all good news: From my point of view, it pushes back the origin of H. sapiens from the Neanderthals and Denisovans.” The possibility that humans were a distinct group so early shakes up the human family tree, promising to lead to new debate about when and where the branches belong.

    Author: Ann Gibbons | Source: ScienceMag/AAAS [September 11, 2015]

  • Genetics: Tweak in gene expression may have helped humans walk upright

    Genetics: Tweak in gene expression may have helped humans walk upright

    Consider the engineering marvel that is your foot. Be it hairy or homely, without its solid support you'd be hard-pressed to walk or jump normally.

    Tweak in gene expression may have helped humans walk upright
    Researchers have identified a change in gene expression between humans and primates that may have helped give us this 
    edge when it comes to walking upright. And they did it by studying a tiny fish called the threespine stickleback that has 
    evolved radically different skeletal structures to match environments around the world  
    [Credit: Flickr/Emilian Robert Vicol]

    Now, researchers at the Stanford University School of Medicine and the HudsonAlpha Institute for Biotechnology in Huntsville, Alabama, have identified a change in gene expression between humans and primates that may have helped give us this edge when it comes to walking upright. And they did it by studying a tiny fish called the threespine stickleback that has evolved radically different skeletal structures to match environments around the world.

    "It's somewhat unusual to have a research project that spans from fish all the way to humans, but it's clear that tweaking the expression levels of molecules called bone morphogenetic proteins can result in significant changes not just in the skeletal armor of the stickleback, but also in the hind-limb development of humans and primates," said David Kingsley, PhD, professor of developmental biology at Stanford. "This change is likely part of the reason why we've evolved from having a grasping hind foot like a chimp to a weight-bearing structure that allows us to walk on two legs."

    Kingsley, who is also a Howard Hughes Medical Institute investigator, is the senior author of a paper describing the work that will be >published in Cell. The lead author is former Stanford postdoctoral scholar Vahan Indjeian, PhD, now head of a research group at Imperial College London.

    Adapting to different environments

    The threespine stickleback is remarkable in that it has evolved to have many different body structures to equip it for life in different parts of the world. It sports an exterior of bony plates and spines that act as armor to protect it from predators. In marine environments, the plates are large and thick; in freshwater, the fish have evolved to have smaller, lighter-weight plates, perhaps to enhance buoyancy, increase body flexibility and better slip out of the grasp of large, hungry insects. Kingsley and his colleagues wanted to identify the regions of the fish's genome responsible for the skeletal differences that have evolved in natural populations.

    The researchers identified the area of the genome responsible for controlling armor plate size, and then looked for differences there in 11 pairs of marine and freshwater fish with varying armor-plate sizes. They homed in on a region that includes the gene for a bone morphogenetic protein family member called GDF6. Due to changes in the regulatory DNA sequence near this gene, freshwater sticklebacks express higher levels of GDF6, while their saltwater cousins express less. Strikingly, marine fish genetically engineered to contain the regulatory sequence of freshwater fish expressed higher levels of GDF6 and developed smaller armor plates, the researchers found.

    Regulatory regions in humans vs. chimps

    Kingsley and his colleagues wondered whether changes in GDF6 expression levels might also have contributed to critical skeletal modifications during human evolution. The possibility was not as far-fetched as it might seem. Other studies by evolutionary biologists, including Kingsley, have shown that small changes in the regulatory regions of key developmental genes can have profound effects in many vertebrates.

    They began by working with colleagues in the laboratory of Gill Bejerano, PhD, Stanford associate professor of developmental biology, of computer science and of pediatrics, to compare differences in the genomes of chimps and humans. In previous surveys, they found over 500 places in which humans have lost regulatory regions that are conserved from chimps and many other mammals. Two of these occur near the GDF6 gene. They homed in on one in particular.

    "This regulatory information was shared through about 100 million years of evolution," said Kingsley. "And yet, surprisingly, this region is missing in humans."

    To learn more about what the GDF6 regulatory region might be controlling, the researchers used the chimp regulatory DNA to control the production of a protein that is easy to visualize in mice. Laboratory mice with the chimp regulatory DNA coupled to the reporter protein strongly and specifically expressed the protein in their hind limbs, but not their forelimbs, and in their lateral toes, but not the big toes of the hind limbs. Mice genetically engineered to lack the ability to produce GDF6 in any part of their bodies had skull bones that were smaller than normal and their toes were shorter than those of their peers. Together, these findings gave the researchers a clue that GDF6 might play a critical role in limb development and evolution.

    The big toe: an explanation

    The fact that humans are missing the hind-limb-regulatory region probably means that we express less of the gene in our legs and feet during development, but comparable amounts in our nascent arms, hands and skulls. Loss of this particular regulatory sequence would also shorten lateral toes but not the first toe of feet. This may help explain why the big toe is aligned with other short, lateral toes in humans. Such a modification would create a more sturdy foot with which to walk upright.

    "These bone morphogenetic proteins are strong signals for bone and cartilage growth in all types of animals," said Kingsley.

    "You can evolve new skeletal structures by changing where and when the signals are expressed, and it's very satisfying to see similar regulatory principles in action whether you are changing the armor of a stickleback, or changing specific hind-limb structures during human evolution."

    Author: Krista Conger | Source: Stanford University Medical Center [January 07, 2016]

  • Philippines: What Hunter-Gatherers can tell us about fundamental human social networks

    Philippines: What Hunter-Gatherers can tell us about fundamental human social networks

    Long before the advent of social media, human social networks were built around sharing a much more essential commodity: food. Now, researchers reporting on the food sharing networks of two contemporary groups of hunter-gatherers in the >Cell Press journal Current Biology provide new insight into fundamental nature of human social organization.

    What hunter-gatherers can tell us about fundamental human social networks
    This photograph shows seafood gathering among Agata children 
    [Credit: Rodolph Schlaepfer]

    The new work reveals surprising similarities between the Agta of the Philippines and Mbendjele of the Republic of Congo. In both places, individuals maintain a three-tiered social network that appears to buffer them against day-to-day shortfalls in foraging returns.

    "Previous research has suggested that social networks across human cultures are structured in similar ways," says Mark Dyble of University College London. "Across societies, there appear to be similar limits on the number of social relationships individuals are able to maintain, and many societies are said to have a 'multilevel' structure. Our work on contemporary hunter-gatherer groups sheds light on how this distinctive social structure may have benefited humans in our hunting-and-gathering past."

    While previous studies have identified similarities in social structure across hunter-gatherer populations, the researchers say that the new work is the first to explore how hunter-gatherers' distinctive, "multilevel" social organization structures social life and cooperation in important activities such as foraging and food sharing.

    "No other apes share food to the extent that humans do," says Andrea Migliano, principal investigator of the Leverhulme Trust-funded Hunter-Gatherers Resilience Project. "Hunter-gatherers' multi-level social structure exists in different groups, to help regulate these cooperative systems. Furthermore, multi-level social structures regulate social rules, friendship and kinship ties, and the spread of social norms, promoting a more efficient sharing and cooperation. Sharing is a crucial adaptation to hunter-gatherers' lifestyles, central to their resilience -- and central to the evolution of mankind."

    What hunter-gatherers can tell us about fundamental human social networks
    Food sharing among the BaYaka 
    [Credit: Gul Deniz Salali]

    The Agta live in northeast Luzon, Philippines. Their primary source of protein is fish, supplemented by inter-tidal foraging, hunting, honey collecting, and gathering of wild foods. The Mbendjele live in an area spanning northern Republic of Congo and southern Central African Republic, where they hunt for meat in the forest. Both groups also trade wild-caught meat or fish for cultivated foods, including rice and manioc.

    Dyble, Migliano, and their colleagues collected data on food sharing by living with the two communities for many months, making observations on how often households shared food with each other. From this they constructed social networks of food sharing.

    "Although we had an idea of how camps split into food sharing clusters 'on the ground,' we were able to test these using algorithms which are able to identify sub-communities within the nine camps we studied," Dyble explains.

    Their analysis showed that food sharing is closely related to social organization. In both communities, individuals maintain a three-tiered social network. First is their immediate household, most often consisting of five or six individuals, second is a cluster of three to four closely related households who share food frequently, and third is the wider camp.

    What hunter-gatherers can tell us about fundamental human social networks
    Food processing among the BaYaka hunter-gathers 
    [Credit: Gul Deniz Salali]

    "Despite being from different continents and living in very different ecologies, both groups of hunter-gatherers had a strikingly similar social organization," Dyble says.

    "Cooperation and especially food sharing are essential for survival in a hunting-and-gathering economy," Dyble says. "The proverb that 'it takes a village to raise a child' is certainly true for hunter-gatherers, who, without food sharing to mitigate the day-to-day shortfalls in foraging, could simply not survive."

    Dyble says that they now intend to explore the structure of other types of social networks in the hunter-gatherer communities, such as cooperation in childcare, and their overlap with food sharing.

    Source: Cell Press [July 21, 2016]

  • Human Evolution: Monkeys are seen making stone flakes so humans are 'not unique' after all

    Human Evolution: Monkeys are seen making stone flakes so humans are 'not unique' after all

    Researchers have observed wild-bearded capuchin monkeys in Brazil deliberately break stones, unintentionally creating flakes that share many of the characteristics of those produced by early Stone Age hominins. The difference is that the capuchins' flakes are not intentional tools for cutting and scraping, but seem to be the by-product of hammering or 'percussive behaviour' that the monkeys engage in to extract minerals or lichen from the stones.

    Monkeys are seen making stone flakes so humans are 'not unique' after all
    Wild-bearded capuchin monkey in Serra da Capivara National Park, Brazil, unintentionally creating
     fractured flakes and cores [Credit: Michael Haslam/ Primate Archaeology Group]

    In a paper, >published in Nature, the research team says this finding is significant because archaeologists had always understood that the production of multiple stone flakes with characteristics such as conchoidal fractures and sharp cutting edges was a behaviour unique to hominins. The paper suggests that scholars may have to refine their criteria for identifying intentionally produced early stone flakes made by hominins, given capuchins have been observed unintentionally making similar tools.

    The research is authored by researchers from the University of Oxford, University College London and University of Sao Paulo in Brazil. The team observed individual monkeys in Serra da Capivara National Park unintentionally creating fractured flakes and cores. While hominins made stone flake tools for cutting and butchery tasks, the researchers admit that it is unclear why monkeys perform this behaviour. They suggest that the capuchins may be trying to extract powdered silicon (known to be an essential trace nutrient) or to remove lichen for some as yet unknown medicinal purpose. At no point did the monkeys try to cut or scrape using the flakes, says the study.

    Lead author Dr Tomos Proffitt, from the School of Archaeology at the University of Oxford, comments: 'Within the last decade, studies have shown that the use and intentional production of sharp-edged flakes are not necessarily linked to early humans (the genus Homo) who are our direct relatives, but instead were used and produced by a wider range of hominins. However, this study goes one step further in showing that modern primates can produce archaeologically identifiable flakes and cores with features that we thought were unique to hominins.


    'This does not mean that the earliest archaeological material in East Africa was not made by hominins. It does, however, raise interesting questions about the possible ways this stone tool technology developed before the earliest examples in the archaeological record appeared. It also tells us what this stone tool technology might look like. There are important questions too about the uniqueness of early hominin behaviour. These findings challenge previous ideas about the minimum level of cognitive and morphological complexity required to produce numerous conchoidal flakes.'

    The monkeys were observed engaging in 'stone on stone percussion', whereby they individually selected rounded quartzite cobbles and then using one or two hands struck the 'hammer-stone' forcefully and repeatedly on quartzite cobbles embedded in a cliff face. This action crushed the surface and dislodged cobbled stones, and the hand-held 'hammer stones' became unintentionally fractured, leaving an identifiable primate archaeological record. As well as using the active hammer-stone to crush 'passive hammers' (stones embedded in the outcrop), the capuchins were also observed re-using broken hammer-stones as 'fresh' hammers.

    The research team examined 111 fragmented stones collected from the ground immediately after the capuchins had dropped them, as well as from the surface and excavated areas in the site. They gathered complete and broken hammer-stones, complete and fragmented flakes and passive hammers. Around half of the fractured flakes exhibited conchoidal fracture, which is typically associated with the hominin production of flakes.

    Bearded capuchins and some Japanese macaques are known to pound stones directly against each other, but the paper remarks that the capuchins in Serra da Capivara National Park are the only wild primates to be observed doing this for the purpose of damaging the stones.

    Co-author and leader of the Primate Archaeology (Primarch) project Michael Haslam, from the University of Oxford, says: 'Our understanding of the new technologies adopted by our early ancestors helps shape our view of human evolution. The emergence of sharp-edged stone tools that were fashioned and hammered to create a cutting tool was a big part of that story. The fact that we have discovered monkeys can produce the same result does throw a bit of a spanner in the works in our thinking on evolutionary behaviour and how we attribute such artefacts. While humans are not unique in making this technology, the manner in which they used them is still very different to what the monkeys seem capable of.'

    Source: University of Oxford [October 19, 2016]

  • Palaeontology: Fossil bee nests provide clues about the environment in which Australopithecus africanus lived

    Palaeontology: Fossil bee nests provide clues about the environment in which Australopithecus africanus lived

    Analysis of the first fossil bee nest from the Plio-Pleistocene of South Africa suggests that the human ancestor Australopithecus africanus lived in a dry savannah environment, according a study published in the >open-access journal PLOS ONE by Jennifer Parker from University College London, United Kingdom, and colleagues.

    Fossil bee nests provide clues about the environment in which Australopithecus africanus lived
    Photographs of each of the Individual Pieces of Extracted Nest [CreditJennifer F. Parker et al./PLOS ONE (2016)]

    Little paleoecological information is available for the site in South Africa where the first Au. africanus fossil—the 'Taung Child'—was discovered. However, insect-related fossils, abundant at the discovery site, can yield insights into the paleoenvironment. Bees, for example, tend to build characteristic nests in characteristic conditions. Parker and colleagues analyzed CT scans of a fossil bee nest that was discovered near the Taung Child site to determine its internal structure and thus the kinds of bees that built it.

    Fossil bee nests provide clues about the environment in which Australopithecus africanus lived
    Locality and stratigraphy of the deposits [Credit: Jennifer F. Parker et al./PLOS ONE (2016)]

    The fossil nest was exceptionally well preserved, and the structure of its cells and tunnels suggested that it was made by a ground-nesting solitary bee. These bees typically nest on bare, light, dry soil that is exposed to the sun, which bolsters other recent evidence that Au. africanus lived in dry savannahs. Insect-related fossils are common but largely overlooked at sites where human ancestors lived, the researchers said, and their work underscores the contribution such fossils can make to understanding the environments where human ancestors lived.

    Fossil bee nests provide clues about the environment in which Australopithecus africanus lived
    Three different individual cells. (A) and (B) have been extracted from the nest, and (C) (although broken 
    in half laterally) remains in the matrix [Credit: Jennifer F. Parker et al./PLOS ONE (2016)]

    "When Raymond Dart published his description of the 'Taung Child' in 1925 he profoundly changed our understanding of human evolution," says study co-author Philip Hopley. "In the 90 years following his discovery, attention of anthropologists has moved to other African sites and specimens, and research at Taung has been hampered by the complex geology and uncertain dating. New research at Taung is helping to reconstruct the environment in which this enigmatic little hominin lived and died."

    Source: Public Library of Science [September 29, 2016]

  • Genetics: Genes for nose shape found

    Genetics: Genes for nose shape found

    Genes that drive the shape of human noses have been identified by a UCL-led study. The four genes mainly affect the width and 'pointiness' of noses which vary greatly between different populations. The new information adds to our understanding of how the human face evolved and may help contribute to forensic DNA technologies that build visual profiles based on an individual's genetic makeup.

    Genes for nose shape found
    Variation between nose shape and the specific genes responsible 
    [Credit: Dr Kaustubh Adhikari, UCL]

    The study, published today in >Nature Communications, analysed a population of over 6,000 people with varied ancestry across Latin America to study the differences in normal facial features and identify the genes which control the shape of the nose and chin.

    The researchers identified five genes which play a role in controlling the shape of specific facial features. DCHS2, RUNX2, GLI3 and PAX1 affect the width and pointiness of the nose and another gene -- EDAR -- affects chin protrusion.

    "Few studies have looked at how normal facial features develop and those that have only looked at European populations, which show less diversity than the group we studied. What we've found are specific genes which influence the shape and size of individual features, which hasn't been seen before.

    "Finding out the role each gene plays helps us to piece together the evolutionary path from Neanderthal to modern humans. It brings us closer to understanding how genes influence the way we look, which is important for forensics applications," said the first author of the report, Dr Kaustubh Adhikari, UCL Cell & Developmental Biology.

    People have different shaped facial features based on their genetic heritage and this is partly due to how the environment influenced the evolution of the human genome. The nose, for example, is important for regulating the temperature and humidity of the air we breathe in so developed different shapes in warmer and cooler climates.

    "It has long been speculated that the shape of the nose reflects the environment in which humans evolved. For example, the comparatively narrower nose of Europeans has been proposed to represent an adaptation to a cold, dry climate. Identifying genes affecting nose shape provides us with new tools to examine this question, as well as the evolution of the face in other species. It may also help us understand what goes wrong in genetic disorders involving facial abnormalities," explained Professor Andrés Ruiz-Linares UCL Biosciences, who led the study.

    The team collected and analysed DNA samples from 6,630 volunteers from the CANDELA cohort recruited in Brazil, Colombia, Chile, Mexico and Peru. After an initial screen, a sample size of 5,958 was used. This group included individuals of mixed European (50%), Native American (45%) and African (5%) ancestry, resulting in a large variation in facial features.

    Both men and women were assessed for 14 different facial features and whole genome analysis identified the genes driving differences in appearance.

    A subgroup of 3,000 individuals had their features assessed using a 3D reconstruction of the face in order to obtain exact measurements of facial features and the results identified the same genes.

    The study identified genes that are involved in bone and cartilage growth and the development of the face. GLI3, DCHS2 and PAX1 are all genes known to drive cartilage growth -- GLI3 gave the strongest signal for controlling the breadth of nostrils, DCHS2 was found to control nose 'pointiness' and PAX1 also influences nostril breadth. RUNX2 which drives bone growth was seen to control nose bridge width.

    The genes GLI3, DCHS2 and RUNX2 are known to show strong signals of recent selection in modern humans compared to archaic humans such as Neanderthals and Denisovans; GLI3 in particular undergoing rapid evolution.

    Source: University College London [May 19, 2016]

  • Natural Heritage: More infectious diseases emerging because of climate change

    Natural Heritage: More infectious diseases emerging because of climate change

    The appearance of infectious diseases in new places and new hosts, such as West Nile virus and Ebola, is a predictable result of climate change, says a noted zoologist affiliated with the Harold W. Manter Laboratory of Parasitology at the University of Nebraska-Lincoln.

    More infectious diseases emerging because of climate change
    In some areas of Costa Rica, howler monkeys like this one are infected with parasites 
    once limited to capuchin and spider monkeys. After humans hunted capuchins and 
    spider monkeys out of existence in the region, the parasites immediately switched to
    howler monkeys, where they persist today [Credit: Daniel Brooks Photography]

    In an article published online today in conjunction with a special issue of the Philosophical Transactions of the Royal Society B, Daniel Brooks warns that humans can expect more such illnesses to emerge in the future, as climate change shifts habitats and brings wildlife, crops, livestock, and humans into contact with pathogens to which they are susceptible but to which they have never been exposed before.

    "It's not that there's going to be one 'Andromeda Strain' that will wipe everybody out on the planet," Brooks said, referring to the 1971 science fiction film about a deadly pathogen. "There are going to be a lot of localized outbreaks putting pressure on medical and veterinary health systems. It will be the death of a thousand cuts."

    Brooks and his co-author, Eric Hoberg, a zoologist with the U.S. National Parasite Collection of the USDA's Agricultural Research Service, have personally observed how climate change has affected very different ecosystems. During his career, Brooks has focused primarily on parasites in the tropics, while Hoberg has worked primarily in Arctic regions.

    Each has observed the arrival of species that hadn't previously lived in that area and the departure of others, Brooks said.

    "Over the last 30 years, the places we've been working have been heavily impacted by climate change," Brooks said in an interview last week. "Even though I was in the tropics and he was in the Arctic, we could see something was happening." Changes in habitat mean animals are exposed to new parasites and pathogens.

    For example, Brooks said, after humans hunted capuchin and spider monkeys out of existence in some regions of Costa Rica, their parasites immediately switched to howler monkeys, where they persist today. Some lungworms in recent years have moved northward and shifted hosts from caribou to muskoxen in the Canadian Arctic.

    But for more than 100 years, scientists have assumed parasites don't quickly jump from one species to another because of the way parasites and hosts co-evolve.

    Brooks calls it the "parasite paradox." Over time, hosts and pathogens become more tightly adapted to one another. According to previous theories, this should make emerging diseases rare, because they have to wait for the right random mutation to occur.

    However, such jumps happen more quickly than anticipated. Even pathogens that are highly adapted to one host are able to shift to new ones under the right circumstances.

    Brooks and Hoberg call for a "fundamental conceptual shift" recognizing that pathogens retain ancestral genetic capabilities allowing them to acquire new hosts quickly.

    "Even though a parasite might have a very specialized relationship with one particular host in one particular place, there are other hosts that may be as susceptible," Brooks said.

    In fact, the new hosts are more susceptible to infection and get sicker from it, Brooks said, because they haven't yet developed resistance.

    Though resistance can evolve fairly rapidly, this only changes the emergent pathogen from an acute to a chronic disease problem, Brooks adds.

    "West Nile Virus is a good example - no longer an acute problem for humans or wildlife in North America, it nonetheless is hhere to stay," he said.

    The answer, Brooks said, is for greater collaboration between the public and veterinary health communities and the "museum" community - the biologists who study and classify life forms and how they evolve.

    In addition to treating human cases of an emerging disease and developing a vaccine for it, he said, scientists need to learn which non-human species carry the pathogen.

    Knowing the geographic distribution and the behavior of the non-human reservoirs of the pathogen could lead to public health strategies based on reducing risk of infection by minimizing human contact with infected animals, much likethose that reduced the incidence of malaria and yellow fever by reducing human contact with mosquitos.

    Museum scientists versed in understanding the evolutionary relationships among species could use this knowledge to anticipate the risk of the pathogen becoming established outside of its native range.

    Brooks, who earned his bachelor's and master's degrees from the University of Nebraska-Lincoln, was a zoology professor at the University of Toronto for 30 years until he retired early in 2011 to devote more time to his study of emerging infectious disease. In addition to being a senior research fellow with UNL's Manter Laboratory, he is a visiting senior fellow at the Universidade Federal do Parana, Brazil, funded by the Ciencias sem Fronteiras (Sciences without Borders) of the Brazilian government, and a visiting scholar with Debrecen University in Hungary.

    Brooks' and Hoberg's article, "Evolution in action: climate change, biodiversity dynamics and emerging infectious disease," is part of a Philosophical Transactions of the Royal Society B issue on "Climate change and vector-borne diseases of humans," edited by Paul Parham, a specialist in infectious disease epidemiology at Imperial College in London.

    "We have to admit we're not winning the war against emerging diseases," Brooks said. "We're not anticipating them. We're not paying attention to their basic biology, where they might come from and the potential for new pathogens to be introduced."

    Source: University of Nebraska-Lincoln [February 16, 2015]

  • Forensics: Single strain of plague bacteria sparked multiple historical and modern pandemics

    Forensics: Single strain of plague bacteria sparked multiple historical and modern pandemics

    A single entry of the plague bacterium into Europe was responsible for the Black Plague of the mid-14th century. This same strain sparked recurrent outbreaks on the continent over the following four centuries before spreading to China, where it triggered the third plague pandemic in the late 19th century. The wave of plague that traveled to Asia later became the source population for modern-day epidemics around the globe. The bacterium's routes over time were revealed by genome analyses published in >Cell Host & Microbe.

    Single strain of plague bacteria sparked multiple historical and modern pandemics
    This is a photo of a mass burial site in Ellwangen, Germany 
    [Credit: Rainer Weiss]

    "Our study is the first to provide genetic support for plague's travel from Europe into Asia after the Black Death, and it establishes a link between the Black Death in the mid-14th century and modern plague," says first author Maria Spyrou of the Max Planck Institute for the Science of Human History.

    The plague bacterium, Yersinia pestis, is one of the deadliest pathogens in human history, sparking three major pandemics: the Plague of Justinian, which struck the Roman Empire during the 6th and 8th centuries; the second plague pandemic, which first erupted in Europe in the mid-14th-century Black Death and continued to strike the continent in recurrent outbreaks until the mid-18th century; and the third plague pandemic, which emerged in China during the late 19th century.

    Evidence based on ancient DNA samples and historical climate patterns has suggested that the recurrent outbreaks of the second pandemic were caused by multiple reintroductions of Yersinia pestis into Europe, most likely from Asia. Moreover, some scientists have recently suggested that the plague bacterium migrated from Europe to Asia after the Black Death, later giving rise to the third pandemic. But until now, genomic evidence to support this model was missing.

    To shed light on the origin and path of the second pandemic, Spyrou and co-senior study authors Alexander Herbig, Kirsten Bos, and Johannes Krause of the Max Planck Institute for the Science of Human History collected samples from plague-infected individuals buried in mass grave sites in Barcelona, Spain, and Ellwangen, Germany, as well as a single grave in Bolgar City, Russia.

    "The mass burials where our samples come from often represent events where hundreds of people died of plague during a single outbreak," Herbig says. "This gives us an impression about how significant the impact of this disease was during medieval times."

    The Bolgar City site was dated to the second half of the 14th century using coin artifacts known to have been minted after 1362. Radiocarbon dates from bone fragments and tooth roots were estimated at 1300-1420 for Barcelona, 1298-1388 for Bolgar City, and 1486-1627 for Ellwangen.

    Single strain of plague bacteria sparked multiple historical and modern pandemics
    This visual abstract depicts the findings of Spyrou et al., who sequenced historical Yersinia pestisgenomes 
    from victims of the Black Death and subsequent outbreaks in Europe. Their data suggest a connection between 
    the Black Death and the modern-day plague pandemic as well as the persistence of plague in Europe 
    between the 14th and 18th centuries [Credit: Spyrou et al./Cell Host & Microbe 2016]

    After analyzing DNA extracts from the teeth of 178 individuals, the researchers identified Y. pestis DNA in extracts from 32 individuals. Three individuals from Barcelona, Bolgar City, and Ellwangen had sufficient Y. pestis DNA for genome-level analysis. The researchers sequenced the genomes of these three ancient Y. pestis strains and compared them to 148 previously sequenced ancient and modern strains to reconstruct the Y. pestis phylogenetic tree.

    The phylogenetic analysis revealed no differences between their Black Death strain from Barcelona and previously genotyped strains from mid-14th-century London. The simultaneous presence of the same strain in both southern and northern Europe suggests that Y. pestis entered the continent in a single wave rather than through multiple pulses during the Black Death.

    These Black Death strains from London and Barcelona gave rise to a branch containing the Ellwangen strain and previously sequenced 18th-century strains from the Great Plague of Marseille in France. Moreover, all three newly reconstructed genomes and previously sequenced genomes from the second plague grouped together in the same branch on the phylogenetic tree. Taken together, these findings suggest that a single Y. pestis lineage was responsible for the Black Death and subsequent second pandemic outbreaks throughout Europe.

    Meanwhile, the Bolgar City strain shared similarities with the Black Death London strain as well as all modern strains. This finding supports the idea that one Y. pestis lineage traveled from Europe to Asia after the Black Death, later sparking the third pandemic and modern-day epidemics worldwide.

    "Our most significant finding revealed a link between the Black Death and modern plague," Krause says. "Though several plague lineages exist in China today, only the lineage that caused the Black Death several centuries earlier left Southeast Asia in the late 19th century pandemic and rapidly achieved a near worldwide distribution."

    In future studies, the researchers plan to gain additional insights into the entry and end points of the Black Death in Europe. They hope to expand their sample range and explore these regions further to better understand the route traveled by the disease, the evolutionary changes it acquired at different stages, and the toll it had on the human population.

    "We hope that our findings will highlight the importance for more extensive sampling and sequencing of both ancient and modern plague isolates around the world, and open up new research themes regarding the role played by Europe and West Asia in plague's evolution and ecology," Bos says.

    Source: Cell Press [June 09, 2016]

  • Evolution: Study sheds light on the function of the penis bone in male competition

    Evolution: Study sheds light on the function of the penis bone in male competition

    A new UCL study examines how the baculum (penis bone) evolved in mammals and explores its possible function in primates and carnivores—groups where many species have a baculum, but some do not.

    Study sheds light on the function of the penis bone in male competition
    Baculum bones [Credit: WikiCommons]

    The baculum has been described as "the most diverse of all bones", varying dramatically in length, width and shape in the male mammals where it is present.

    The research, published today in the Royal Society journal >Proceedings of the Royal Society B, shows that the ancestral mammal, like humans, did not have a baculum - but both ancestral primates and carnivores did. The work uncovers that the baculum first evolved in mammals between 145 and 95 million years ago.

    The study found that prolonged intromission - defined as penetration for longer than 3 minutes - was correlated with baculum presence across the course of primate evolution. Prolonged intromission was also found to predict a longer baculum in primates and carnivores.

    High levels of postcopulatory sexual competition between males also predicted longer bacula in primates.

    First author, Matilda Brindle (UCL Anthropology), said: "Our findings suggest that the baculum plays an important role in supporting male reproductive strategies in species where males face high levels of postcopulatory sexual competition. Prolonging intromission helps a male to guard a female from mating with any competitors, increasing his chances of passing on his genetic material."

    The findings of the study may also provide clues as to why humans do not have a baculum.

    When any cultural aspects of sex are removed and a male's aim is solely to ejaculate, humans have a short intromission duration.

    In species where mating occurs between multiple males and multiple females (known as polygamy), there is acute competition between males to fertilise a female. However, human mating systems are not like this. Instead humans tend to be monogamous or, more rarely, polygynous (where one male mates with multiple females). In these circumstances, only one male has access to a female and postcopulatory competition between males is absent or very low level.

    Brindle added: "Interestingly, humans have neither prolonged intromission durations, nor high levels of postcopulatory sexual competition. Given the results of our study, this may help to unravel the mystery of why the baculum was lost in the human lineage."

    Chimpanzees and bonobos, humans' closest relatives, have very small bacula (between about 6-8mm) and short intromission durations (around 7 seconds for chimpanzees and 15 seconds for bonobos). However, they are characterised by polygamous mating systems, so they experience high levels of postcopulatory competition between males. The researchers suggest that this may be why these species have retained a baculum - albeit a small one.

    Co-author, Dr Kit Opie (UCL Anthropology), commented: "After the human lineage split from chimpanzees and bonobos and our mating system shifted towards monogamy, probably after 2mya, the evolutionary pressures retaining the baculum likely disappeared. This may have been the final nail in the coffin for the already diminished baculum, which was then lost in ancestral humans."

    Source: University College London [December 14, 2016]

  • Kenya: 17 million-year-old whale fossil pinpoints date of East Africa's puzzling uplift

    Kenya: 17 million-year-old whale fossil pinpoints date of East Africa's puzzling uplift

    Uplift associated with the Great Rift Valley of East Africa and the environmental changes it produced have puzzled scientists for decades because the timing and starting elevation have been poorly constrained.

    17 million-year-old whale fossil pinpoints date of East Africa's puzzling uplift
    A 17 million-year-old whale fossil stranded far inland in Kenya now sheds light on the
     timing and starting elevation of East Africa's puzzling tectonic uplift, says paleontologist 
    Louis Jacobs, Southern Methodist University, Dallas, who rediscovered the fossil 
    [Credit: Southern Methodist University]

    Now paleontologists have tapped a fossil from the most precisely dated beaked whale in the world -- and the only stranded whale ever found so far inland on the African continent -- to pinpoint for the first time a date when East Africa's mysterious elevation began.

    The 17 million-year-old fossil is from the beaked Ziphiidae whale family. It was discovered 740 kilometers inland at an elevation of 620 meters in modern Kenya's harsh desert region, said vertebrate paleontologist Louis L. Jacobs, Southern Methodist University, Dallas.

    At the time the whale was alive, it would have been swimming far inland up a river with a low gradient ranging from 24 to 37 meters over more than 600 to 900 kilometers, said Jacobs, a co-author of the study.

    The study, published in the Proceedings of the National Academy of Sciences, provides the first constraint on the start of uplift of East African terrain from near sea level.

    "The whale was stranded up river at a time when east Africa was at sea level and was covered with forest and jungle," Jacobs said. "As that part of the continent rose up, that caused the climate to become drier and drier. So over millions of years, forest gave way to grasslands. Primates evolved to adapt to grasslands and dry country. And that's when -- in human evolution -- the primates started to walk upright."

    Identified as a Turkana ziphiid, the whale would have lived in the open ocean, like its modern beaked cousins. Ziphiids, still one of the ocean's top predators, are the deepest diving air-breathing mammals alive, plunging to nearly 10,000 feet to feed, primarily on squid.

    17 million-year-old whale fossil pinpoints date of East Africa's puzzling uplift
    A map of Africa and Kenya showing where a 17-million-year-old whale fossil
     was found far inland [Credit: Wichura/PNAS]

    In contrast to most whale fossils, which have been discovered in marine rocks, Kenya's beached whale was found in river deposits, known as fluvial sediments, said Jacobs, a professor in the Roy M. Huffington Department of Earth Sciences of SMU's Dedman College of Humanities and Sciences. The ancient large Anza River flowed in a southeastward direction to the Indian Ocean. The whale, probably disoriented, swam into the river and could not change its course, continuing well inland.

    "You don't usually find whales so far inland," Jacobs said. "Many of the known beaked whale fossils are dredged by fishermen from the bottom of the sea."

    Determining ancient land elevation is very difficult, but the whale provides one near sea level.

    "It's rare to get a paleo-elevation," Jacobs said, noting only one other in East Africa, determined from a lava flow.

    Beaked whale fossil surfaced after going missing for more than 30 years

    The beaked whale fossil was discovered in 1964 by J.G. Mead in what is now the Turkana region of northwest Kenya.

    Mead, an undergraduate student at Yale University at the time, made a career at the Smithsonian Institution, from which he recently retired. Over the years, the Kenya whale fossil went missing in storage. Jacobs, who was at one time head of the Division of Paleontology for the National Museums of Kenya, spent 30 years trying to locate the fossil. His effort paid off in 2011, when he rediscovered it at Harvard University and returned it to the National Museums of Kenya.

    The fossil is only a small portion of the whale, which Mead originally estimated was 7 meters long during its life. Mead unearthed the beak portion of the skull, 2.6 feet long and 1.8 feet wide, specifically the maxillae and premaxillae, the bones that form the upper jaw and palate.

    The researchers reported their findings in "A 17 million-year-old whale constrains onset of uplift and climate change in East Africa" online at the PNAS web site.

    Modern cases of stranded whales have been recorded in the Thames River in London, swimming up a gradient of 2 meters over 70 kilometers; the Columbia River in Washington state, a gradient of 6 meters over 161 kilometers; the Sacramento River in California, a gradient of 4 meters over 133 kilometers; and the Amazon River in Brazil, a gradient of 1 meter over 1,000 kilometers.

    Source: Southern Methodist University [March 17, 2015]

  • Environment: New Ice Age to begin by 2030?

    Environment: New Ice Age to begin by 2030?

    The arrival of intense cold similar to the one raged during the “Little Ice Age”, which froze the world during the XVII century and in the beginning of the XVIII century, is expected in the years 2030–2040.

    New Ice Age to begin by 2030?
    In this 1677 painting by Abraham Hondius, "The Frozen Thames, looking Eastwards 
    towards Old London Bridge," people are shown enjoying themselves on the ice
    [Credit: Museum of London]

    These conclusions were presented by Prof. V. Zharkova (Northumbria University) during the National Astronomy Meeting in Llandudno in Wales by the international group of scientists, which also includes Dr Helen Popova of the Skobeltsyn Institute of Nuclear Physics and of the Faculty of Physics of the Lomonosov Moscow State University, professor Simon Shepherd of Bradford University (UK) and Dr Sergei Zharkov of Hull University (UK).

    It is known, that the Sun has its own magnetic field, the amplitude and spatial configuration of which vary with time. The formation and decay of strong magnetic fields in the solar atmosphere results in the changes of electromagnetic radiation from the Sun, of the intensity of plasma flows coming from the Sun, and the number of sunspots on the Sun’s surface. The study of changes in the number of sunspots on the Sun’s surface has a cyclic structure vary in every 11 years that is also imposed on the Earth environment as the analysis of carbon-14, beryllium-10 and other isotopes in glaciers and in the trees showed.

    There are several cycles with different periods and properties, while the 11-year cycle, the 90-year cycle are the best known of them. The 11-year cycle appears as a cyclical reduction in stains on the surface of the Sun every 11 years. Its 90-year variation is associated with periodic reduction in the number of spots in the 11-year cycle in the 50-25%. In 17th century though there was a prolonged of the solar activity called the Maunder minimum, which lasted roughly from 1645 to 1700. During this period, there were only about 50 sunspots instead of the usual 40-50 thousand sunspots. Analysis of solar radiation showed that its maxima and minima almost coincide with the maxima and minima in the number of spots.

    In the current study published in 3 peer-reviewed papers the researchers analyzed a total background magnetic field from full disk magnetograms for three cycles of solar activity (21-23) by applying the so-called “principal component analysis”, which allows to reduce the data dimensionality and noise and to identify waves with the largest contribution to the observational data. This method can be compared with the decomposition of white light on the rainbow prism detecting the waves of different frequencies. As a result, the researchers developed a new method of analysis, which helped to uncover, that the magnetic waves in the Sun are generated in pairs, with the main pair covering 40% of variance of the data (Zharkova et al, 2012, MNRAS). The principal component pair is responsible for the variations of a dipole field of the Sun, which is changing its polarity from pole to pole during 11 year solar activity.

    New Ice Age to begin by 2030?
    This image of the sun was taken by NASA Solar Dynamics Observations 
    mission on July 15, 2015, at a wavelength of 304 Angstroms 
    [Credit: NASA Solar Dynamics Observations]

    The magnetic waves travel from the opposite hemisphere to the Northern hemisphere (odd cycles) or to Southern hemisphere (even cycles), with the phase shift between the waves increasing with a cycle number. The waves interacts with each other in the hemisphere where they have maximum (Northern for odd cycles and Southern for even ones). These two components are assumed to originate in two different layers in the solar interior (inner and outer) with close, but not equal, frequencies and a variable phase shift (Popova et al, 2013, AnnGeo).

    The scientists managed to derive the analytical formula, describing the evolution of these two waves and calculated the summary curve which was linked to the variations of sunspot numbers, the original proxy of solar activity, if one used the modulus of the summary curve (Shepherd et al, 2014, ApJ). By using this formula the scientists made first the prediction of magnetic activity in the cycle 24, which gave 97% accuracy in comparison with the principal components derived from the observations.

    Inspired by this success, the authors extended the prediction of these two magnetic waves to the next two cycle 25 and 26 and discovered that the waves become fully separated into the opposite hemispheres in cycle 26 and thus have little chance of interacting and producing sunspot numbers. This will lead to a sharp decline in solar activity in years 2030 – 2040 comparable with the conditions existed previously during the Maunder minimum in the XVII century when there were only about 50-70 sunspots observed instead of the usual 40-50 thousand expected.

    The new reduction of the solar activity will lead to reduction of the solar irradiance by 3W/m^2 according to Lean (1997). This resulted in significant cooling of Earth and very severe winters and cold summers. “Several studies have shown that the Maunder Minimum coincided with the coldest phase of global cooling, which was called “the Little Ice Age”. During this period there were very cold winters in Europe and North America. In the days of the Maunder minimum the water in the river Thames and the Danube River froze, the Moscow River was covered by ice every six months, snow lay on some plains year round and Greenland was covered by glaciers” – says Dr Helen Popova, who developed a unique physical-mathematical model of the evolution of the magnetic activity of the sun and used it to gain the patterns of occurrence of global minima of solar activity and gave them a physical interpretation.

    If the similar reduction will be observed during the upcoming Maunder minimum this can lead to the similar cooling of the Earth atmosphere. According to Dr Helen Popova, if the existing theories about the impact of solar activity on the climate are true, then this minimum will lead to a significant cooling, similar to the one occurred during the Maunder minimum.

    New Ice Age to begin by 2030?
    Montage of images of solar activity between August 1991 and September 2001 
    [Credit: Yohkoh/ISAS/Lockheed-Martin/NAOJ/U. Tokyo/NASA]

    However, only the time will show soon enough (within the next 5-15 years) if this will happen.

    “Given that our future minimum will last for at least three solar cycles, which is about 30 years, it is possible, that the lowering of the temperature will not be as deep as during the Maunder minimum. But we will have to examine it in detail. We keep in touch with climatologists from different countries. We plan to work in this direction”, — Dr Helen Popova said.

    The notion that solar activity affects the climate, appeared long ago. It is known, for example, that a change in the total quantity of the electromagnetic radiation by only 1% can result in a noticeable change in the temperature distribution and air flow all over the Earth. Ultraviolet rays cause photochemical effect, which leads to the formation of ozone at the altitude of 30-40 km. The flow of ultraviolet rays increases sharply during chromospheric flares in the Sun. Ozone, which absorbs the sun’s rays well enough, is being heated and it affects the air currents in the lower layers of the atmosphere and, consequently, the weather. Powerful emission of corpuscles, which can reach the Earth’s surface, arise periodically during the high solar activity. They can move in complex trajectories, causing aurorae, geomagnetic storms and disturbances of radio communication.

    By increasing the flow of particles in the lower atmospheric layers air flows of meridional direction enhance: warm currents from the south with even greater energy rush in the high latitudes and cold currents, carrying arctic air, penetrate deeper into the south. In addition, the solar activity affects the intensity of fluxes of galactic cosmic rays. The minimum activity streams become more intense, which also affects the chemical processes in the Earth’s atmosphere

    The study of deuterium in the Antarctic showed that there were five global warmings and four Ice Ages for the past 400 thousand years. The increase in the volcanic activity comes after the Ice Age and it leads to the greenhouse gas emissions. The magnetic field of the Sun grows, what means that the flux of cosmic rays decreases, increasing the number of clouds and leading to the warming again. Next comes the reverse process, where the magnetic field of the Sun decreases, the intensity of cosmic ray rises, reducing the clouds and making the atmosphere cool again. This process comes with some delay.

    Dr Helen Popova responds cautiously, while speaking about the human influence on climate.

    “There is no strong evidence, that global warming is caused by human activity. The study of deuterium in the Antarctic showed that there were five global warmings and four Ice Ages for the past 400 thousand years. People first appeared on the Earth about 60 thousand years ago. However, even if human activities influence the climate, we can say, that the Sun with the new minimum gives humanity more time or a second chance to reduce their industrial emissions and to prepare, when the Sun will return to normal activity”, — Dr Helen Popova summarized.

    Source: Lomonosov Moscow State University [July 17, 2015]

  • Philippines: Camp stability predicts patterns of Hunter–Gatherer cooperation

    Philippines: Camp stability predicts patterns of Hunter–Gatherer cooperation

    Reciprocal food-sharing is more prevalent in stable hunter-gatherer camps, shows new UCL research that sheds light on the evolutionary roots of human cooperation.

    Camp stability predicts patterns of hunter–gatherer cooperation
    Agta camp members [Credit: Daniel Smith, UCL Anthropology]

    The research explores patterns of food-sharing among the Agta, a population of Filipino hunter-gatherers. It finds that reciprocal food-sharing is more prevalent in stable camps (with fewer changes in membership over time); while in less stable camps individuals acquire resources by taking from others -- known as 'demand sharing'.

    Exploring social dynamics in the last remaining groups of present day hunter-gatherers is essential for understanding the factors that shaped the evolution of our widespread cooperation, especially with non-kin.

    The study, published in the Royal Society journal >Open Science, is the first to report a real-world association between patterns of cooperation and group stability.

    First author of the study, Daniel Smith (UCL Anthropology), said: "Cooperation between unrelated individuals is rare in animals, yet extensive among humans. Reciprocity -- the principle of "you scratch my back, I scratch yours" -- may explain this non-kin cooperation, yet requires stable groups and repeated interactions to evolve.

    "Our research shows that hunter-gatherer cooperation is extremely flexible -- reflecting either reciprocity or demand sharing depending on the frequency of repeated interactions between camp members."

    Camp stability predicts patterns of hunter–gatherer cooperation
    Agta camp member participating in study [Credit: Daniel Smith, UCL Anthropology]

    The authors looked at two types of food-sharing data. Firstly, details of actual food-sharing from six Agta camps were examined to explore whether differences in camp stability predicted patterns of food-sharing. Secondly, games were also conducted in which individuals were asked to distribute resources between themselves and other camp-mates. These games were conducted with 324 Agta over 18 separate camps.

    In one of the games, participants were shown their own picture, along with other randomly selected adults from camp. They were then given a number of small wooden tokens, each representing 125g rice, equal to the number of camp-mates' photos. Not every picture including the subject's could end up with rice on it, introducing a social dilemma regarding whether to share, as it would be impossible for everyone to receive rice. Participants then decided, token by token, whether to keep the rice for themselves, or to give to a camp-mate.

    The results showed that, firstly, stable camps were more likely to display reciprocity in the actual food-sharing analyses. Patterns of food-sharing in unstable camps were not reciprocal, consistent with demand sharing, whereby individuals take resources from others rather than being given them. Secondly, individuals from more stable camps were increasingly likely to give resources to others and less likely to take resources in the games.

    Despite differences in cooperation, individuals from both stable and unstable camps received resources from others. This distribution of resources among camp-mates is crucial for hunter-gatherers' survival. As foraging success is variable it is likely that, on any given day, an individual may return to camp with no resources. Food-sharing is therefore essential to reduce the likelihood of individuals going without resources for extended lengths of time.

    Last author, Professor Ruth Mace (UCL Anthropology), added: "Food sharing and cooperation are at the centre of hunter-gatherers lifestyle. No other Apes share food or cooperate to the extent that humans do. A complex network of sharing and cooperation exists within camps and between camps in different hunter-gatherer groups, regulated by social rules, friendship ties, food taboos, kinship and supernatural beliefs. Sharing is a crucial adaptation to hunter-gatherers' lifestyles, central to their resilience -- and central to the evolution of humankind."

    Source: University College London - UCL [July 13, 2016]

  • UK: Discovery of rare Anglo-Saxon burials is revealed

    UK: Discovery of rare Anglo-Saxon burials is revealed

    Archaeologists have uncovered an important Anglo-Saxon cemetery in an excavation in advance of a conservation and fishing lake and flood defence system at Great Ryburgh in Norfolk. The waterlogged conditions of the river valley led to the remarkable preservation of burials that are extremely rare in the archaeological record, including plank-lined graves and tree-trunk coffins dating from the 7th-9th century AD.

    Discovery of rare Anglo-Saxon burials is revealed
    Aerial view of the excavation of an Anglo Saxon cemetery at Great Ryburgh 
    [Credit: (c) MOLA]

    It is believed that this may have been the final resting place for a community of early Christians including a timber structure thought to be a church or chapel, of which there are few examples from this period. The wooden grave markers, east-west alignment of the coffins and the evident lack of grave goods all support the Christian origins of the cemetery.

    Anglo-Saxon coffins seldom survive because wood decays over time. Until now, evidence of these amazing burials has largely consisted of staining in the ground from decayed wood, but archaeologists have been able to properly excavate these rare and fascinating coffins, graves and skeletons because they have been brilliantly preserved in the ground in a combination of acidic sand and alkaline water.

    Discovery of rare Anglo-Saxon burials is revealed
    MOLA archaeologist excavates human remains at great Ryburgh 
    [Credit: (c) MOLA]

    The 81 dug-out coffins discovered comprise oak trees split in two length-ways and hollowed out. This type of coffin is first seen in Europe in the Early Bronze Age and reappears in the early medieval period. From Britain they are mentioned in antiquarian records from the late 19th century, but this is the very first time they have been properly excavated and recorded by modern archaeologists.

    We know that the burials, in hollowed out logs, were positioned in the lower half and the upper half rested on top to form a lid. Although they aren’t decorative, it would have taken considerable effort to hollow a single coffin, an estimated four man days. The fact that evidence for similar burial rites is also found in earlier cemeteries may signify the blending of pagan and Christian traditions.

    Discovery of rare Anglo-Saxon burials is revealed
    An archaeologist records human remains at Great Ryburgh 
    [Credit: (c) MOLA]

    The six plank-lined graves are very rare in in this country and these are believed to be the earliest known examples from Britain. The graves were cut into the ground, lined with expertly hewn timber planks, the body placed inside and planks positioned on top to form a cover.

    The relationship between the two burial types is not fully understood, but may denote an evolution in burial practices. Tree-ring dating is being undertaken to date the timber. The discovery is shedding light on a previously unknown religious site and the fascinating lives of this early Christian rural community.

    Middle Saxon burial with wooden coffin by MOLA on Sketchfab
    Continued research and scientific testing, in the form of ancient DNA, stable isotope and dental calculus analysis, will help to develop biographies for the people buried and paint a picture of the people who lived here.

    Archaeologists hope to be able to say more about where these people came from, whether they were related, and what their diet and health were like, once research is complete.

    Source: Museum of London Archaeology [November 16, 2016]

  • Travel: 'Ancient Egypt Transformed: The Middle Kingdom' at Metropolitan Museum of Art, New York

    Travel: 'Ancient Egypt Transformed: The Middle Kingdom' at Metropolitan Museum of Art, New York

    The reunification of ancient Egypt achieved by Nebhepetre Mentuhotep II—the first pharaoh of the Middle Kingdom—was followed by a great cultural flowering that lasted nearly 400 years. During the Middle Kingdom (mid-Dynasty 11–Dynasty 13, around 2030–1650 B.C.), artistic, cultural, religious, and political traditions first conceived and instituted during the Old Kingdom were revived and reimagined.

    'Ancient Egypt Transformed: The Middle Kingdom' at Metropolitan Museum of Art, New York
    Head of a Statue of Amenemhat III Wearing the White Crown (ca. 1859–1813 BC) 
    [Credit: Carlsberg Glyptotek, Copenhagen]

    This transformational era will be represented through 230 powerful and compelling masterworks (individual objects and groups of objects) in the major international exhibition Ancient Egypt Transformed: The Middle Kingdom, opening October 12 at New York’s Metropolitan Museum of Art. Fashioned with great subtlety and sensitivity, and ranging in size from monumental stone sculptures to delicate examples of jewelry, the works of art are drawn from the preeminent collection of the Metropolitan—which is particularly rich in Middle Kingdom material—and 37 museums and collections in North America and Europe. This is the first comprehensive presentation of Middle Kingdom art and culture and features many objects that have never been shown in the United States.

    “The astonishing continuity of ancient Egyptian culture, with certain basic principles lasting for thousands of years, gives the impression of changelessness,” said Adela Oppenheim, Curator of Egyptian Art. “But the works of art in the exhibition will show that ancient Egypt constantly evolved, and was remarkably flexible within a consistent framework. New ideas did not simply replace earlier notions; they were added to what had come before, creating a fascinating society of ever-increasing complexity.”

    Arranged thematically and chronologically, the exhibition opens with a forceful, monumental statue of King Mentuhotep II, carved in an intentionally archaic style that suggests a link to the legendary kings of early Egypt (ca. 3300 B.C.).

    'Ancient Egypt Transformed: The Middle Kingdom' at Metropolitan Museum of Art, New York
    Colossal Statue of a Pharaoh from Egypt’s Middle Kingdom,
     (ca. 1919–1885 BC) [Credit: Ägyptisches Museum und 
    Papyrussammlung, Staatliche Museen, Berlin]

    Profound changes in the concept of kingship are demonstrated through a series of royal statues that span several hundred years. Early Middle Kingdom pharaohs are often depicted with youthful faces and confident expressions. In contrast, the evocative, fleshy faces and deep-set, hooded eyes of later kings present startling images of maturity and humanity.

    During the 12th Dynasty, the construction of pyramid complexes resumes, after a lapse of more than a century. The innovation found in these complexes is exemplified by that of Senwosret III (around 1878-1840 B.C.) at Dahshur, site of Metropolitan Museum excavations since 1990. A detailed 1-to-150 scale model made by Ron Street, Supervisor of the Museum’s Three-Dimensional Imaging, Prototyping, and Molding Studio, will show the original form of the complex.

    Royal women were always closely connected to the pharaoh, as evidenced by the placement of their burials and chapels near those of the king. Although less is known about Middle Kingdom queens and princesses, indicating altered or perhaps diminished roles during the era, some of the finest ancient Egyptian jewelry was produced for elite women of the time. Inscriptions and symbolic motifs endowed the jewelry with spiritual power and related to the role these women played in supporting the kings as guarantors of divine order on earth.

    'Ancient Egypt Transformed: The Middle Kingdom' at Metropolitan Museum of Art, New York
    Relief with Senwosret I Running toward Min (detail), Dynasty XII, 
    reign of Senwosret I (ca. 1961-1917 BC) [Credit: Petrie Museum
     of Egyptian Archaeology, London]

    During the Middle Kingdom, members of all levels of Egyptian society commissioned a wider variety of works of art and constructed commemorative chapels at significant holy sites; statues of squatting figures rendered in a cubic, block-like form and statues in an attitude of prayer originate during this period.

    Thematic groupings of artifacts from domestic settings, tombs, and temples reveal the breadth of artistic expression, evolution of styles, and the transformation of many aspects of Egyptian culture and religion. First attested in the Middle Kingdom are a variety of intriguing, protective magical objects, notably some that were believed to shield pregnant women and young children. Among them are curved hippopotamus tusks that are unique to this era and are covered with images of beneficial supernatural beings.

    The family was always a central element of ancient Egyptian culture, but in the Middle Kingdom larger groups of relatives are depicted together on stelae and sculptures. One remarkable stela on view features depictions of 30 individuals. Others include poignant groupings of mothers and their young children.

    'Ancient Egypt Transformed: The Middle Kingdom' at Metropolitan Museum of Art, New York
    Statue of the Sealer Nemtihotep [Credit: Staatliche Museen zu Berlin, 
    Ägyptisches Museum und Papyrussammlung]

    Significant changes in afterlife beliefs during the Middle Kingdom are manifest in new kinds of objects present in burials. Intricately and finely rendered miniatures of painted wood (so-called models) from the tomb of the chancellor Meketre (ca. 1980–75 B.C.), excavated by the Metropolitan in 1920, depict food production, manufacturing, and journeys by boat; they are displayed in several sections of the exhibition.

    During the Middle Kingdom, the god Osiris gained importance as a funerary deity and, from then on, the dead at all levels of society became manifestations of the god. Because Osiris functioned as the ruler of the underworld, certain symbols and regalia that had been the sole prerogative of the reigning king were appropriated for non-royal use: mummies sometimes had a uraeus on the brow (a stylized cobra usually seen on a pharaoh’s crown), and a flail (a standard attribute of the pharaoh) could be placed inside a coffin. Canopic jars, which held the organs of the deceased, became much more ornate in the Middle Kingdom. With lids in the form of human heads, the vessels are small sculptures in their own right.

    As devotion to Osiris increased, his cult center at Abydos (north of Luxor) gained prominence. Annual processions were held between his temple and his supposed burial place in the desert to the west. To participate eternally in these elaborate rites and ensure their afterlife, individuals at many levels of society erected memorial chapels—some with outstanding artworks—for themselves and their families along the procession route.

    'Ancient Egypt Transformed: The Middle Kingdom' at Metropolitan Museum of Art, New York
    Head of the Statue of a Bovine Deity, (ca. 2124–1981 BC)
    [Credit: Louvre Museum]

    Deity temples—largely built of fragile mud brick in the Old Kingdom—were transformed dramatically during the Middle Kingdom, when pharaohs commissioned decorated stone temples throughout the country. Decoration included spectacular sculpture and reliefs depicting the pharaoh presenting offerings to and revering deities, as well as statues of the gods.

    Colossal statues were first made during the Old Kingdom, but they became much more common during the Middle Kingdom. Portions of colossal statues will be displayed throughout the exhibition, with the largest in scale being presented at its conclusion: a monumental head of pharaoh Amenemhat III that was transported to the Delta city of Bubastis and reused by later kings. The same happened to the colossal statue of a mid-Dynasty 12 king, on loan from the Ägyptisches Museum und Papyrussammlung, Berlin, and on view in the Museum’s Great Hall. Pharaohs after the Middle Kingdom reused the monuments of their predecessors, particularly those of the Middle Kingdom, both for economy and to link themselves to the past.

    General knowledge of the history of the Middle Kingdom—the achievements of its artists, its religious beliefs, burial customs, and relationships with other lands—stems in large part from Metropolitan Museum sponsorship of numerous excavations at Middle Kingdom sites including Deir el-Bahri (1920–31), Lisht (1906–34, 1984–91), and Dahshur (1990–present).

    Source: The Metropolitan Museum of Art [September 26, 2015]

  • More Stuff: Telegraph: Greece has no legal claim to the Elgin Marbles

    More Stuff: Telegraph: Greece has no legal claim to the Elgin Marbles

    The Greek government has finally acknowledged that the British Museum is the lawful owner of the “Elgin Marbles”. That, at least, is the logical conclusion of the recent news that Greece has dropped its legal claim to the Parthenon Sculptures.

    Telegraph: Greece has no legal right to Elgin Marbles
    The results of a recent poll hosted by the British newspaper 
    The Telegraph

    The surprise announcement came only 48 hours after Amal Clooney and the team at London’s Doughty Street Chambers sent the Greek government a 150-page report admitting that there was only a 15% chance of their success in a British court, and that Greece should consider pursuing the claim at the International Court of Justice. However, quite understandably, the Greek government has decided that what Clooney is really saying is that they have no case.

    The Syriza government is keenly aware that British courts are recognized the world over for their experience in resolving international disputes, including those involving British interests and institutions. So, quite reasonably, the new Greek government has concluded that an international court will probably not reach a different conclusion. Nikos Xydakis, culture minister, has therefore announced that Greece will drop its legal claim and pursue “diplomatic and political” avenues instead.

    This is unsurprising, as — contrary to the widespread misconception — there was nothing illegal about the way in which Lord Elgin saved the Parthenon Sculptures from acute ongoing destruction. The mauling had started when the Greek church smashed up a large number of the ancient temple’s carvings in the fifth century. The Venetians then blew up chunks of the building in 1687. And in the 1800s, when Lord Elgin arrived in Athens, the occupying Ottomans were grinding the sculptures up for limestone and using them for artillery target practice.

    Elgin had intended to commission casts and paintings of the sculptures, but when he saw firsthand the ongoing damage (about 40% of the original sculptures had been pulverised), he acquired an export permit from the Ottoman authorities in Athens, and brought as many as he could back to safety in Britain. It was a personal disaster which bankrupted him, but it has meant that, since 1816, the British Museum has been able to share with its visitors some of the best-preserved Parthenon Sculptures in the world.

    What is usually missing in the emotion of the Elgin Marbles debate is that the British Museum is a universal museum, which tells the story of humanity’s cultural achievements from the dawn of time. In this, the work of the Ancient Greek department is world leading, and part of a network of museum classicists — including those from the New Acropolis Museum in Athens — who work together collaboratively, sharing their knowledge and passion for the classical world with the widest possible public.

    Coincidentally, the British Museum (the nation’s largest tourist attraction) is currently hosting a once-in-a-lifetime exhibition of Greek sculpture, drawing on its own collection and generous loans from other museums all over the world to showcase the evolution of ancient Greek ideas about beauty and the human body. In this breathtaking visual story of the march of classical ideas about aesthetics, the Parthenon Sculptures take their place, contributing eloquently to the state of sculpture in the golden age of Athenian carving under Pheidias.

    The overarching misconception we need to get over is that museum objects belong uniquely to the country in which they were created. If that was so, the world should empty out its leading museums of the foreign artefacts they have purchased or been donated. Athens would be no exception in this, and would be required to return their extensive collections of Egyptian, Chinese, Islamic, and South American art.

    Of course, it is an absurd idea. The world is manifestly enhanced by museums and their depth of specialised knowledge. They are, above all, educational places that enrich us all. The fact that half the surviving sculptures from the Parthenon can be seen in Athens, with the remaining half split between London, Berlin, Munich, Würzburg, Copenhagen, the Vatican, and — thanks to the British Museum — the Hermitage in St Petersburg earlier this year, ensures that the widest possible audience is able to experience for themselves the unique and bewitching ability of fifth-century Athenians to convert rough stone into warm, living flesh.

    Another page has turned definitively in the story of the Parthenon Sculptures. The idea that Lord Elgin or Parliament did something illegal has finally been dropped, and not before time. Now the debate can proceed in a less antagonistic manner, and everyone can acknowledge that it is a question of politics, not looted artefacts.

    As the world has recently discovered from the tragic destruction of Assyrian art at Nimrud, Mosul, and elsewhere in the Middle East, the planet’s heritage does not last unless someone looks after it. And so far, in the case of the Parthenon Sculptures (and indeed its holdings of Assyrian sculpture), the British Museum continues to do the world an enormous service

    Author: Dominic Selwood | Source: The Telegraph [May 14, 2015]

  1. Wonders of Constantinople's underground water world to go on display in Istanbul
  2. The Lapita: Oceanic Ancestors exhibition at the Quai Branly Museum in Paris
  3. Bulgaria to unveil 10,000 unique archaeology treasures
  4. Public to see limestone box that may have been casket for Jesus’ brother
  5. 'Rhodes: A Greek Island and Gateway to the East' at the Louvre